以下为作者原文,图片与外部链接在院内网络不可用。
来源说明:官方 = 数据集作者/机构本人上传;完整转存 = 第三方原样转存;处理版 = 第三方子集、切片或格式转换(可能与原始数据不同)。许可以仓库声明为准,第三方转存的原始许可由工作人员下载前核对。
Figshare Brain Tumor Dataset (Cheng et al. 2015)
Brain tumor MRI dataset from Cheng et al., hosted on Figshare. 3064 T1-weighted contrast-enhanced MRI slices from 233 patients with three kinds of brain tumor:
- Meningioma — 708 slices
- Glioma — 1426 slices
- Pituitary tumor — 930 slices
Each slice ships with both a per-pixel binary tumor mask and the original hand-delineated tumor border polyline.
Schema
| Column | Type | Description |
|---|---|---|
id |
string |
Slice ID, "1" to "3064" |
pid |
string |
Patient ID (used to keep splits patient-disjoint) |
label_id |
int32 |
1 = meningioma, 2 = glioma, 3 = pituitary |
label_name |
string |
"meningioma" / "glioma" / "pituitary" |
fold |
int32 |
Pre-computed 5-fold CV index (1..5, patient-disjoint) |
image |
Image |
16-bit grayscale PNG, 512×512, raw T1-CE MRI |
mask |
Image |
8-bit grayscale PNG, 512×512, 0 = bg / 255 = tumor |
tumor_border |
list[float] |
Polyline coordinates [x1, y1, x2, y2, ...] of the manual border |
Splits
| Split | Source | Count |
|---|---|---|
| train | folds 2-5 | 2522 |
| test | fold 1 | 542 |
The fold column is preserved on every row so users can run other CV protocols
(rotate which fold is held out, etc.). Fold assignment is patient-level, so no
patient appears in both train and test of any fold.
Acquisition
T1-weighted contrast-enhanced MRI (after Gd-DTPA injection, 0.1 mmol/kg @ 2 ml/s) acquired between 2005-09 and 2010-10 at Nanfang Hospital (Guangzhou) and General Hospital of Tianjin Medical University, China. In-plane 512×512, pixel spacing 0.49×0.49 mm, slice thickness 6 mm, slice gap 1 mm.
Mask sources
The upstream .mat files ship two semantically equivalent encodings of the
same manual annotation:
1. cjdata.tumorBorder — raw polyline coordinates as drawn by the radiologist.
2. cjdata.tumorMask — the convenience rasterisation of that polyline as a
binary 512×512 image.
This mirror exposes both: mask is the rasterised version (recommended ground
truth for segmentation), tumor_border is the raw polyline.
License
CC BY 4.0 — free use including commercial, attribution required.
Citation
@article{cheng2015enhanced,
title = {Enhanced Performance of Brain Tumor Classification via Tumor Region Augmentation and Partition},
author = {Cheng, Jun and Huang, Wei and Cao, Shuangliang and Yang, Ru and Yang, Wei and Yun, Zhaoqiang and Wang, Zhijian and Feng, Qianjin},
journal = {PLOS ONE},
volume = {10},
number = {10},
pages = {e0140381},
year = {2015},
doi = {10.1371/journal.pone.0140381}
}
Source
- Figshare: https://figshare.com/articles/dataset/brain_tumor_dataset/1512427
- DOI: 10.6084/m9.figshare.1512427
- Paper: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0140381